Index

A

AdaBoostPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_adaboost) ADAModel (class in autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.ada.model) add() (Classifiers method) (Explainers method) (Imputers method) (in module autoprognosis.logger) (PluginLoader method) (Plugins method) (Predictions method) (Preprocessors method) (Regression method) (RiskEstimation method) (UncertaintyQuantification method) AggregatingEnsemble (class in autoprognosis.plugins.ensemble.classifiers) AHAModel (class in autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.aha.model) algorithm (KNeighborsRegressorPlugin attribute) algorithms (KNNPlugin attribute) args (BuildCancelled attribute) (StudyCancelled attribute) auth (NewRiskEstimationAppProto attribute) autoprognosis module autoprognosis.apps module autoprognosis.apps.common module autoprognosis.apps.common.login module autoprognosis.apps.common.pandas_to_streamlit module autoprognosis.apps.extras module autoprognosis.apps.extras.biobank_cvd module autoprognosis.apps.extras.biobank_diabetes module autoprognosis.deploy module autoprognosis.deploy.build module autoprognosis.deploy.proto module autoprognosis.deploy.run module autoprognosis.deploy.utils module autoprognosis.exceptions module autoprognosis.explorers module autoprognosis.explorers.classifiers module autoprognosis.explorers.classifiers_combos module autoprognosis.explorers.core module autoprognosis.explorers.core.defaults module autoprognosis.explorers.core.optimizer module autoprognosis.explorers.core.optimizers module autoprognosis.explorers.core.optimizers.bayesian module autoprognosis.explorers.core.optimizers.hyperband module autoprognosis.explorers.core.selector module autoprognosis.explorers.regression module autoprognosis.explorers.regression_combos module autoprognosis.explorers.risk_estimation module autoprognosis.explorers.risk_estimation_combos module autoprognosis.hooks module autoprognosis.hooks.base module autoprognosis.hooks.default module autoprognosis.logger module autoprognosis.plugins module autoprognosis.plugins.core module autoprognosis.plugins.core.base_plugin module autoprognosis.plugins.core.params module autoprognosis.plugins.ensemble module autoprognosis.plugins.ensemble.classifiers module autoprognosis.plugins.ensemble.combos module autoprognosis.plugins.ensemble.regression module autoprognosis.plugins.ensemble.risk_estimation module autoprognosis.plugins.explainers module autoprognosis.plugins.explainers.base module autoprognosis.plugins.explainers.plugin_invase module autoprognosis.plugins.explainers.plugin_kernel_shap module autoprognosis.plugins.explainers.plugin_lime module autoprognosis.plugins.explainers.plugin_risk_effect_size module autoprognosis.plugins.explainers.plugin_shap_permutation_sampler module autoprognosis.plugins.explainers.plugin_symbolic_pursuit module autoprognosis.plugins.imputers module autoprognosis.plugins.imputers.base module autoprognosis.plugins.imputers.plugin_softimpute module autoprognosis.plugins.pipeline module autoprognosis.plugins.pipeline.generators module autoprognosis.plugins.prediction module autoprognosis.plugins.prediction.base module autoprognosis.plugins.prediction.classifiers module autoprognosis.plugins.prediction.classifiers.base module autoprognosis.plugins.prediction.classifiers.helper_calibration module autoprognosis.plugins.prediction.classifiers.plugin_adaboost module autoprognosis.plugins.prediction.classifiers.plugin_bagging module autoprognosis.plugins.prediction.classifiers.plugin_bernoulli_naive_bayes module autoprognosis.plugins.prediction.classifiers.plugin_catboost module autoprognosis.plugins.prediction.classifiers.plugin_decision_trees module autoprognosis.plugins.prediction.classifiers.plugin_extra_tree_classifier module autoprognosis.plugins.prediction.classifiers.plugin_gaussian_naive_bayes module autoprognosis.plugins.prediction.classifiers.plugin_gaussian_process module autoprognosis.plugins.prediction.classifiers.plugin_gradient_boosting module autoprognosis.plugins.prediction.classifiers.plugin_hist_gradient_boosting module autoprognosis.plugins.prediction.classifiers.plugin_knn module autoprognosis.plugins.prediction.classifiers.plugin_lda module autoprognosis.plugins.prediction.classifiers.plugin_lgbm module autoprognosis.plugins.prediction.classifiers.plugin_linear_svm module autoprognosis.plugins.prediction.classifiers.plugin_logistic_regression module autoprognosis.plugins.prediction.classifiers.plugin_multinomial_naive_bayes module autoprognosis.plugins.prediction.classifiers.plugin_neural_nets module autoprognosis.plugins.prediction.classifiers.plugin_perceptron module autoprognosis.plugins.prediction.classifiers.plugin_qda module autoprognosis.plugins.prediction.classifiers.plugin_random_forest module autoprognosis.plugins.prediction.classifiers.plugin_ridge_classifier module autoprognosis.plugins.prediction.classifiers.plugin_tabnet module autoprognosis.plugins.prediction.classifiers.plugin_xgboost module

autoprognosis.plugins.prediction.regression module autoprognosis.plugins.prediction.regression.base module autoprognosis.plugins.prediction.regression.plugin_bayesian_ridge module autoprognosis.plugins.prediction.regression.plugin_catboost_regressor module autoprognosis.plugins.prediction.regression.plugin_kneighbors_regressor module autoprognosis.plugins.prediction.regression.plugin_linear_regression module autoprognosis.plugins.prediction.regression.plugin_mlp_regressor module autoprognosis.plugins.prediction.regression.plugin_neural_nets_regression module autoprognosis.plugins.prediction.regression.plugin_random_forest_regressor module autoprognosis.plugins.prediction.regression.plugin_tabnet_regressor module autoprognosis.plugins.prediction.regression.plugin_xgboost_regressor module autoprognosis.plugins.prediction.risk_estimation module autoprognosis.plugins.prediction.risk_estimation.base module autoprognosis.plugins.prediction.risk_estimation.benchmarks module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.aha module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.aha.model module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.framingham module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.framingham.model module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.qrisk3 module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.qrisk3.model module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.ada module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.ada.model module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.diabetes_uk module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.diabetes_uk.model module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.finrisk module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.finrisk.model module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.qdiabetes module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.qdiabetes.model module autoprognosis.plugins.prediction.risk_estimation.benchmarks.prostate_cancer module autoprognosis.plugins.prediction.risk_estimation.benchmarks.prostate_cancer.predict module autoprognosis.plugins.prediction.risk_estimation.helper_lifelines module autoprognosis.plugins.prediction.risk_estimation.plugin_cox_ph module autoprognosis.plugins.prediction.risk_estimation.plugin_coxnet module autoprognosis.plugins.prediction.risk_estimation.plugin_deephit module autoprognosis.plugins.prediction.risk_estimation.plugin_loglogistic_aft module autoprognosis.plugins.prediction.risk_estimation.plugin_lognormal_aft module autoprognosis.plugins.prediction.risk_estimation.plugin_survival_xgboost module autoprognosis.plugins.prediction.risk_estimation.plugin_weibull_aft module autoprognosis.plugins.preprocessors module autoprognosis.plugins.preprocessors.base module autoprognosis.plugins.preprocessors.dimensionality_reduction module autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_fast_ica module autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_feature_agglomeration module autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_gauss_projection module autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_nop module autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_pca module autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_variance_threshold module autoprognosis.plugins.preprocessors.feature_scaling module autoprognosis.plugins.preprocessors.feature_scaling.plugin_feature_normalizer module autoprognosis.plugins.preprocessors.feature_scaling.plugin_maxabs_scaler module autoprognosis.plugins.preprocessors.feature_scaling.plugin_minmax_scaler module autoprognosis.plugins.preprocessors.feature_scaling.plugin_nop module autoprognosis.plugins.preprocessors.feature_scaling.plugin_normal_transform module autoprognosis.plugins.preprocessors.feature_scaling.plugin_scaler module autoprognosis.plugins.preprocessors.feature_scaling.plugin_uniform_transform module autoprognosis.plugins.uncertainty module autoprognosis.plugins.uncertainty.base module autoprognosis.plugins.uncertainty.plugin_cohort_explainer module autoprognosis.plugins.uncertainty.plugin_conformal_prediction module autoprognosis.plugins.uncertainty.plugin_jackknife module autoprognosis.plugins.utils module autoprognosis.plugins.utils.cast module autoprognosis.plugins.utils.decorators module autoprognosis.plugins.utils.metrics module autoprognosis.plugins.utils.simulate module autoprognosis.studies module autoprognosis.studies._base module autoprognosis.studies.classifiers module autoprognosis.studies.regression module autoprognosis.studies.risk_estimation module autoprognosis.utils module autoprognosis.utils.data_encoder module autoprognosis.utils.distributions module autoprognosis.utils.encoder module autoprognosis.utils.metrics module autoprognosis.utils.pandas module autoprognosis.utils.parallel module autoprognosis.utils.pip module autoprognosis.utils.redis module autoprognosis.utils.risk_estimation module autoprognosis.utils.serialization module autoprognosis.utils.tester module autoprognosis.utils.third_party module autoprognosis.utils.third_party.metrics module autoprognosis.utils.third_party.nonparametric module autoprognosis.utils.third_party.util module autoprognosis.utils.torch module autoprognosis.version module average() (in module autoprognosis.plugins.ensemble.combos) average_precision_score() (classifier_metrics method)

B

BaggingPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_bagging) base_estimators (AdaBoostPlugin attribute) (BaggingPlugin attribute) BaseAggregator (class in autoprognosis.plugins.ensemble.combos) BaseAppProto (class in autoprognosis.deploy.proto) BaseEnsemble (class in autoprognosis.plugins.ensemble.classifiers) BaseRegressionEnsemble (class in autoprognosis.plugins.ensemble.regression) BasicNet (class in autoprognosis.plugins.prediction.classifiers.plugin_neural_nets) (class in autoprognosis.plugins.prediction.regression.plugin_neural_nets_regression) BayesianOptimizer (class in autoprognosis.explorers.core.optimizers.bayesian) BayesianRidgePlugin (class in autoprognosis.plugins.prediction.regression.plugin_bayesian_ridge)

benchmark() (in module autoprognosis.plugins.utils.decorators) BernoulliNaiveBayesPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_bernoulli_naive_bayes) bitmask_intervals() (in module autoprognosis.plugins.explainers.plugin_invase) bitmasks() (in module autoprognosis.plugins.explainers.plugin_invase) booster (XGBoostPlugin attribute) (XGBoostRegressorPlugin attribute) (XGBoostRiskEstimationPlugin attribute) brier_score() (in module autoprognosis.utils.third_party.metrics) BuildCancelled Builder (class in autoprognosis.deploy.build) BuilderProgress (class in autoprognosis.deploy.build)

C

calibrate() (CohortRule method) calibrated_model() (in module autoprognosis.plugins.prediction.classifiers.helper_calibration) calibrations (AdaBoostPlugin attribute) cancel() (Builder method) (BuilderProgress method) (DefaultHooks method) (Hooks method) CatBoostPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_catboost) CatBoostRegressorPlugin (class in autoprognosis.plugins.prediction.regression.plugin_catboost_regressor) Categorical (class in autoprognosis.plugins.core.params) CensoringDistributionEstimator (class in autoprognosis.utils.third_party.nonparametric) change_output() (AdaBoostPlugin method) (BaggingPlugin method) (BayesianRidgePlugin method) (BernoulliNaiveBayesPlugin method) (CatBoostPlugin method) (CatBoostRegressorPlugin method) (ClassifierPlugin method), [1] (CoxnetRiskEstimationPlugin method) (CoxPHPlugin method) (DecisionTreePlugin method) (DeepHitRiskEstimationPlugin method) (ExtraTreeClassifierPlugin method) (FastICAPlugin method) (FeatureAgglomerationPlugin method) (FeatureNormalizerPlugin method) (GaussianNaiveBayesPlugin method) (GaussianProcessPlugin method) (GaussianRandomProjectionPlugin method) (GradientBoostingPlugin method) (HistGradientBoostingPlugin method) (ImputerPlugin method), [1] (KNeighborsRegressorPlugin method) (KNNPlugin method) (LightGBMPlugin method) (LinearDiscriminantAnalysisPlugin method) (LinearRegressionPlugin method) (LinearSVMPlugin method) (LogisticRegressionPlugin method) (LogLogisticAFTPlugin method) (LogNormalAFTPlugin method) (MaxAbsScalerPlugin method) (MinMaxScalerPlugin method) (MLPRegressionPlugin method) (MultinomialNaiveBayesPlugin method) (NeuralNetsPlugin method) (NeuralNetsRegressionPlugin method) (NopPlugin method), [1] (NormalTransformPlugin method) (PCAPlugin method) (PerceptronPlugin method) (PipelineMeta method) (Plugin method) (PredictionPlugin method), [1] (PreprocessorPlugin method), [1] (QuadraticDiscriminantAnalysisPlugin method) (RandomForestPlugin method) (RandomForestRegressionPlugin method) (RegressionPlugin method), [1] (RidgeClassifierPlugin method) (RiskEstimationPlugin method), [1] (ScalerPlugin method) (SoftImputePlugin method) (TabNetPlugin method) (TabNetRegressorPlugin method) (UniformTransformPlugin method) (VarianceThresholdPlugin method) (WeibullAFTPlugin method) (XGBoostPlugin method) (XGBoostRegressorPlugin method) (XGBoostRiskEstimationPlugin method)

check_arrays_survival() (in module autoprognosis.utils.third_party.util) check_patience() (ParamRepeatPruner method) check_trial() (ParamRepeatPruner method) check_y_survival() (in module autoprognosis.utils.third_party.util) CheckboxColumn (class in autoprognosis.apps.common.pandas_to_streamlit) checkpoint (Builder property) (BuilderProgress property) classes (LogisticRegressionPlugin attribute) classifier_metrics (class in autoprognosis.utils.tester) ClassifierPlugin (class in autoprognosis.plugins.prediction.classifiers) (class in autoprognosis.plugins.prediction.classifiers.base) Classifiers (class in autoprognosis.plugins.prediction.classifiers) ClassifierSeeker (class in autoprognosis.explorers.classifiers) ClassifierStudy (class in autoprognosis.studies.classifiers) clean_blocks() (in module autoprognosis.apps.common.login) client() (RedisBackend method) CohortExplainerPlugin (class in autoprognosis.plugins.uncertainty.plugin_cohort_explainer) CohortMgmt (class in autoprognosis.plugins.uncertainty.plugin_cohort_explainer) CohortRule (class in autoprognosis.plugins.uncertainty.plugin_cohort_explainer) comparative_models (NewRiskEstimationAppProto attribute) components() (ContinuousDataEncoder method) components_interval() (FastICAPlugin static method) (FeatureAgglomerationPlugin static method) (FeatureNormalizerPlugin static method) (GaussianRandomProjectionPlugin static method) (MaxAbsScalerPlugin static method) (MinMaxScalerPlugin static method) (NopPlugin static method), [1] (NormalTransformPlugin static method) (PCAPlugin static method) (PreprocessorPlugin static method), [1] (ScalerPlugin static method) (UniformTransformPlugin static method) (VarianceThresholdPlugin static method) compress_df() (in module autoprognosis.utils.pandas) concordance_index_censored() (in module autoprognosis.utils.third_party.metrics) concordance_index_ipcw() (in module autoprognosis.utils.third_party.metrics) ConformalPredictionPlugin (class in autoprognosis.plugins.uncertainty.plugin_conformal_prediction) ContinuousDataEncoder (class in autoprognosis.utils.data_encoder) CoxnetRiskEstimationPlugin (class in autoprognosis.plugins.prediction.risk_estimation.plugin_coxnet) CoxPHPlugin (class in autoprognosis.plugins.prediction.risk_estimation.plugin_cox_ph) create_log_and_print_function() (in module autoprognosis.logger) create_study() (BayesianOptimizer method) criterions (DecisionTreePlugin attribute) (ExtraTreeClassifierPlugin attribute) (RandomForestPlugin attribute) (RandomForestRegressionPlugin attribute) critical() (in module autoprognosis.logger) cvd_female_raw() (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.qrisk3.model) cvd_male_raw() (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.qrisk3.model)

D

dataframe_encode() (in module autoprognosis.utils.data_encoder) dataframe_hash() (in module autoprognosis.utils.serialization) dataset_path (BaseAppProto attribute) (NewClassificationAppProto attribute) (NewRiskEstimationAppProto attribute) DatetimeEncoder (class in autoprognosis.utils.data_encoder) debug() (in module autoprognosis.logger) DecisionTreePlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_decision_trees) decode() (EncodersCallbacks method)

DeepHitRiskEstimationPlugin (class in autoprognosis.plugins.prediction.risk_estimation.plugin_deephit) default() (NpEncoder method) (numpy_encoder method) DefaultHooks (class in autoprognosis.hooks.default) DiabetesUKModel (class in autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.diabetes_uk.model) diagnostics() (CohortMgmt method) diagnostics_df() (CohortMgmt method) diagnostics_headers() (CohortMgmt method) DropdownColumn (class in autoprognosis.apps.common.pandas_to_streamlit)

E

EarlyStoppingExceeded (class in autoprognosis.explorers.core.optimizers.bayesian) enable_explainer() (AggregatingEnsemble method) (BaseEnsemble method) (BaseRegressionEnsemble method) (RiskEnsemble method) (RiskEnsembleCV method) (StackingEnsemble method) (WeightedEnsemble method) (WeightedEnsembleCV method) (WeightedRegressionEnsemble method) enable_reproducible_results() (in module autoprognosis.utils.distributions) encode() (EncodersCallbacks method) (NpEncoder method) (numpy_encoder method) EncodersCallbacks (class in autoprognosis.utils.data_encoder) EnsembleOptimizer (class in autoprognosis.explorers.core.optimizer) EnsembleSeeker (class in autoprognosis.explorers.classifiers_combos) error() (in module autoprognosis.logger) eval_ada() (in module autoprognosis.apps.extras.biobank_diabetes) eval_aha() (in module autoprognosis.apps.extras.biobank_cvd) eval_diabetesuk() (in module autoprognosis.apps.extras.biobank_diabetes) eval_finrisk() (in module autoprognosis.apps.extras.biobank_diabetes) eval_fram() (in module autoprognosis.apps.extras.biobank_cvd) eval_qdiabetes() (in module autoprognosis.apps.extras.biobank_diabetes) eval_qdiabetes_model_a() (in module autoprognosis.apps.extras.biobank_diabetes) eval_qdiabetes_model_b() (in module autoprognosis.apps.extras.biobank_diabetes) eval_qdiabetes_model_c() (in module autoprognosis.apps.extras.biobank_diabetes) eval_qrisk3() (in module autoprognosis.apps.extras.biobank_cvd) evaluate() (BayesianOptimizer method) (EnsembleOptimizer method) (HyperbandOptimizer method) (Optimizer method) evaluate_auc() (in module autoprognosis.utils.metrics) evaluate_brier_score() (in module autoprognosis.utils.metrics) evaluate_c_index() (in module autoprognosis.utils.metrics) evaluate_ensemble() (BayesianOptimizer method) (HyperbandOptimizer method) evaluate_estimator() (in module autoprognosis.utils.tester) evaluate_estimator_multiple_seeds() (in module autoprognosis.utils.tester) evaluate_regression() (in module autoprognosis.utils.tester) evaluate_regression_multiple_seeds() (in module autoprognosis.utils.tester) evaluate_survival_estimator() (in module autoprognosis.utils.tester) evaluate_survival_estimator_multiple_seeds() (in module autoprognosis.utils.tester) expect_dataframe_for() (in module autoprognosis.plugins.utils.decorators) expect_ndarray_for() (in module autoprognosis.plugins.utils.decorators) expect_type_for() (in module autoprognosis.plugins.utils.decorators) explain() (AdaBoostPlugin method) (AggregatingEnsemble method) (BaggingPlugin method) (BaseEnsemble method) (BaseRegressionEnsemble method) (BayesianRidgePlugin method) (BernoulliNaiveBayesPlugin method) (CatBoostPlugin method) (CatBoostRegressorPlugin method) (ClassifierPlugin method), [1] (CoxnetRiskEstimationPlugin method) (CoxPHPlugin method) (DecisionTreePlugin method) (DeepHitRiskEstimationPlugin method) (ExplainerPlugin method), [1] (ExtraTreeClassifierPlugin method) (GaussianNaiveBayesPlugin method) (GaussianProcessPlugin method) (GradientBoostingPlugin method) (HistGradientBoostingPlugin method) (invaseBase method) (invaseClassifier method) (invaseCV method) (INVASEPlugin method) (invaseRiskEstimation method) (KernelSHAPPlugin method) (KNeighborsRegressorPlugin method) (KNNPlugin method) (LightGBMPlugin method) (LimePlugin method) (LinearDiscriminantAnalysisPlugin method) (LinearRegressionPlugin method) (LinearSVMPlugin method) (LogisticRegressionPlugin method) (LogLogisticAFTPlugin method) (LogNormalAFTPlugin method) (MLPRegressionPlugin method) (MultinomialNaiveBayesPlugin method) (NeuralNetsPlugin method) (NeuralNetsRegressionPlugin method) (PerceptronPlugin method) (PredictionPlugin method), [1] (QuadraticDiscriminantAnalysisPlugin method) (RandomForestPlugin method) (RandomForestRegressionPlugin method) (RegressionPlugin method), [1] (RidgeClassifierPlugin method) (RiskEffectSizePlugin method) (RiskEnsemble method) (RiskEnsembleCV method) (RiskEstimationPlugin method), [1] (ShapPermutationSamplerPlugin method) (StackingEnsemble method) (SymbolicPursuitPlugin method) (TabNetPlugin method) (TabNetRegressorPlugin method) (WeibullAFTPlugin method) (WeightedEnsemble method) (WeightedEnsembleCV method) (WeightedRegressionEnsemble method) (XGBoostPlugin method) (XGBoostRegressorPlugin method) (XGBoostRiskEstimationPlugin method)

ExplainerPlugin (class in autoprognosis.plugins.explainers) (class in autoprognosis.plugins.explainers.base) explainers (BaseAppProto attribute) Explainers (class in autoprognosis.plugins.explainers) explainers (NewClassificationAppProto attribute) (NewRiskEstimationAppProto attribute) extras_cbk (NewRiskEstimationAppProto attribute) extras_cbk() (in module autoprognosis.apps.extras.biobank_cvd) (in module autoprognosis.apps.extras.biobank_diabetes) ExtraTreeClassifierPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_extra_tree_classifier)

F

FastICAPlugin (class in autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_fast_ica) FeatureAgglomerationPlugin (class in autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_feature_agglomeration) FeatureNormalizerPlugin (class in autoprognosis.plugins.preprocessors.feature_scaling.plugin_feature_normalizer) file_copy() (in module autoprognosis.deploy.utils) file_md5() (in module autoprognosis.deploy.utils) finish() (DefaultHooks method) (Hooks method) FINRISKModel (class in autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.finrisk.model) fit() (AdaBoostPlugin method) (ADAModel method) (AggregatingEnsemble method) (AHAModel method) (BaggingPlugin method) (BaseAggregator method) (BaseEnsemble method) (BaseRegressionEnsemble method) (BayesianRidgePlugin method) (BernoulliNaiveBayesPlugin method) (CatBoostPlugin method) (CatBoostRegressorPlugin method) (CensoringDistributionEstimator method) (ClassifierPlugin method), [1] (ClassifierStudy method) (CohortExplainerPlugin method) (ConformalPredictionPlugin method) (ContinuousDataEncoder method) (CoxnetRiskEstimationPlugin method) (CoxPHPlugin method) (DatetimeEncoder method) (DecisionTreePlugin method) (DeepHitRiskEstimationPlugin method) (DiabetesUKModel method) (ExtraTreeClassifierPlugin method) (FastICAPlugin method) (FeatureAgglomerationPlugin method) (FeatureNormalizerPlugin method) (FINRISKModel method) (FraminghamModel method) (GaussianNaiveBayesPlugin method) (GaussianProcessPlugin method) (GaussianRandomProjectionPlugin method) (GradientBoostingPlugin method) (HistGradientBoostingPlugin method) (ImputerPlugin method), [1] (JackknifePlugin method) (KNeighborsRegressorPlugin method) (KNNPlugin method) (LifelinesWrapper method) (LightGBMPlugin method) (LinearDiscriminantAnalysisPlugin method) (LinearRegressionPlugin method) (LinearSVMPlugin method) (LogisticRegressionPlugin method) (LogLogisticAFTPlugin method) (LogNormalAFTPlugin method) (MaxAbsScalerPlugin method) (MinMaxScalerPlugin method) (MLPRegressionPlugin method) (MultinomialNaiveBayesPlugin method) (NeuralNetsPlugin method) (NeuralNetsRegressionPlugin method) (NopPlugin method), [1] (NormalTransformPlugin method) (PCAPlugin method) (PerceptronPlugin method) (PipelineMeta method) (Plugin method) (PredictionPlugin method), [1] (PreprocessorPlugin method), [1] (QDiabetesModel method) (QRisk3Model method) (QuadraticDiscriminantAnalysisPlugin method) (RandomForestPlugin method) (RandomForestRegressionPlugin method) (RegressionPlugin method), [1] (RegressionStudy method) (RidgeClassifierPlugin method) (RiskEnsemble method) (RiskEnsembleCV method) (RiskEstimationPlugin method), [1] (RiskEstimationStudy method) (ScalerPlugin method) (SimpleClassifierAggregator method) (SoftImputePlugin method) (Stacking method) (StackingEnsemble method) (SurvivalFunctionEstimator method) (TabNetPlugin method) (TabNetRegressorPlugin method) (UncertaintyPlugin method), [1] (UniformTransformPlugin method) (VarianceThresholdPlugin method) (WeibullAFTPlugin method) (WeightedEnsemble method) (WeightedEnsembleCV method) (WeightedRegressionEnsemble method) (XGBoostPlugin method) (XGBoostRegressorPlugin method) (XGBoostRiskEstimationPlugin method) fit_intercepts() (in module autoprognosis.plugins.utils.simulate) fit_predict() (AdaBoostPlugin method) (BaggingPlugin method) (BaseAggregator method) (BayesianRidgePlugin method) (BernoulliNaiveBayesPlugin method) (CatBoostPlugin method) (CatBoostRegressorPlugin method) (ClassifierPlugin method), [1] (CoxnetRiskEstimationPlugin method) (CoxPHPlugin method) (DecisionTreePlugin method) (DeepHitRiskEstimationPlugin method) (ExtraTreeClassifierPlugin method) (FastICAPlugin method) (FeatureAgglomerationPlugin method) (FeatureNormalizerPlugin method) (GaussianNaiveBayesPlugin method) (GaussianProcessPlugin method) (GaussianRandomProjectionPlugin method) (GradientBoostingPlugin method) (HistGradientBoostingPlugin method) (ImputerPlugin method), [1] (KNeighborsRegressorPlugin method) (KNNPlugin method) (LightGBMPlugin method) (LinearDiscriminantAnalysisPlugin method) (LinearRegressionPlugin method) (LinearSVMPlugin method) (LogisticRegressionPlugin method) (LogLogisticAFTPlugin method) (LogNormalAFTPlugin method) (MaxAbsScalerPlugin method) (MinMaxScalerPlugin method) (MLPRegressionPlugin method) (MultinomialNaiveBayesPlugin method) (NeuralNetsPlugin method) (NeuralNetsRegressionPlugin method) (NopPlugin method), [1] (NormalTransformPlugin method) (PCAPlugin method) (PerceptronPlugin method) (Plugin method) (PredictionPlugin method), [1] (PreprocessorPlugin method), [1] (QuadraticDiscriminantAnalysisPlugin method) (RandomForestPlugin method) (RandomForestRegressionPlugin method) (RegressionPlugin method), [1] (RidgeClassifierPlugin method) (RiskEstimationPlugin method), [1] (ScalerPlugin method) (SimpleClassifierAggregator method) (SoftImputePlugin method) (Stacking method) (TabNetPlugin method) (TabNetRegressorPlugin method) (UniformTransformPlugin method) (VarianceThresholdPlugin method) (WeibullAFTPlugin method) (XGBoostPlugin method) (XGBoostRegressorPlugin method) (XGBoostRiskEstimationPlugin method)

fit_transform() (AdaBoostPlugin method) (BaggingPlugin method) (BayesianRidgePlugin method) (BernoulliNaiveBayesPlugin method) (CatBoostPlugin method) (CatBoostRegressorPlugin method) (ClassifierPlugin method), [1] (ContinuousDataEncoder method) (CoxnetRiskEstimationPlugin method) (CoxPHPlugin method) (DatetimeEncoder method) (DecisionTreePlugin method) (DeepHitRiskEstimationPlugin method) (ExtraTreeClassifierPlugin method) (FastICAPlugin method) (FeatureAgglomerationPlugin method) (FeatureNormalizerPlugin method) (GaussianNaiveBayesPlugin method) (GaussianProcessPlugin method) (GaussianRandomProjectionPlugin method) (GradientBoostingPlugin method) (HistGradientBoostingPlugin method) (ImputerPlugin method), [1] (KNeighborsRegressorPlugin method) (KNNPlugin method) (LightGBMPlugin method) (LinearDiscriminantAnalysisPlugin method) (LinearRegressionPlugin method) (LinearSVMPlugin method) (LogisticRegressionPlugin method) (LogLogisticAFTPlugin method) (LogNormalAFTPlugin method) (MaxAbsScalerPlugin method) (MinMaxScalerPlugin method) (MLPRegressionPlugin method) (MultinomialNaiveBayesPlugin method) (NeuralNetsPlugin method) (NeuralNetsRegressionPlugin method) (NopPlugin method), [1] (NormalTransformPlugin method) (PCAPlugin method) (PerceptronPlugin method) (Plugin method) (PredictionPlugin method), [1] (PreprocessorPlugin method), [1] (QuadraticDiscriminantAnalysisPlugin method) (RandomForestPlugin method) (RandomForestRegressionPlugin method) (RegressionPlugin method), [1] (RidgeClassifierPlugin method) (RiskEstimationPlugin method), [1] (ScalerPlugin method) (SoftImputePlugin method) (TabNetPlugin method) (TabNetRegressorPlugin method) (UniformTransformPlugin method) (VarianceThresholdPlugin method) (WeibullAFTPlugin method) (XGBoostPlugin method) (XGBoostRegressorPlugin method) (XGBoostRiskEstimationPlugin method) Float (class in autoprognosis.plugins.core.params) forward() (BasicNet method), [1] (Masking method) fqdn() (AdaBoostPlugin class method) (BaggingPlugin class method) (BayesianRidgePlugin class method) (BernoulliNaiveBayesPlugin class method) (CatBoostPlugin class method) (CatBoostRegressorPlugin class method) (ClassifierPlugin class method), [1] (CoxnetRiskEstimationPlugin class method) (CoxPHPlugin class method) (DecisionTreePlugin class method) (DeepHitRiskEstimationPlugin class method) (ExtraTreeClassifierPlugin class method) (FastICAPlugin class method) (FeatureAgglomerationPlugin class method) (FeatureNormalizerPlugin class method) (GaussianNaiveBayesPlugin class method) (GaussianProcessPlugin class method) (GaussianRandomProjectionPlugin class method) (GradientBoostingPlugin class method) (HistGradientBoostingPlugin class method) (ImputerPlugin class method), [1] (KNeighborsRegressorPlugin class method) (KNNPlugin class method) (LightGBMPlugin class method) (LinearDiscriminantAnalysisPlugin class method) (LinearRegressionPlugin class method) (LinearSVMPlugin class method) (LogisticRegressionPlugin class method) (LogLogisticAFTPlugin class method) (LogNormalAFTPlugin class method) (MaxAbsScalerPlugin class method) (MinMaxScalerPlugin class method) (MLPRegressionPlugin class method) (MultinomialNaiveBayesPlugin class method) (NeuralNetsPlugin class method) (NeuralNetsRegressionPlugin class method) (NopPlugin class method), [1] (NormalTransformPlugin class method) (PCAPlugin class method) (PerceptronPlugin class method) (Plugin class method) (PredictionPlugin class method), [1] (PreprocessorPlugin class method), [1] (QuadraticDiscriminantAnalysisPlugin class method) (RandomForestPlugin class method) (RandomForestRegressionPlugin class method) (RegressionPlugin class method), [1] (RidgeClassifierPlugin class method) (RiskEstimationPlugin class method), [1] (ScalerPlugin class method) (SoftImputePlugin class method) (TabNetPlugin class method) (TabNetRegressorPlugin class method) (UniformTransformPlugin class method) (VarianceThresholdPlugin class method) (WeibullAFTPlugin class method) (XGBoostPlugin class method) (XGBoostRegressorPlugin class method) (XGBoostRiskEstimationPlugin class method) FraminghamModel (class in autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.framingham.model) from_arrays() (Surv static method) from_dataframe() (Surv static method)

G

GaussianNaiveBayesPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_gaussian_naive_bayes) GaussianProcessPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_gaussian_process) GaussianRandomProjectionPlugin (class in autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_gauss_projection) generate_dataset_for_horizon() (in module autoprognosis.utils.risk_estimation) generate_login_block() (in module autoprognosis.apps.common.login) generate_menu() (in module autoprognosis.apps.common.pandas_to_streamlit) generate_score() (in module autoprognosis.utils.metrics) get() (Categorical method) (Classifiers method) (CohortMgmt method) (Explainers method) (Float method) (Imputers method) (Integer method) (Params method) (PluginLoader method) (Plugins method) (Predictions method) (Preprocessors method) (Regression method) (RiskEstimation method) (UncertaintyQuantification method) get_any_type() (Plugins method) get_app_name() (in module autoprognosis.deploy.run) get_args() (AdaBoostPlugin method) (BaggingPlugin method) (BayesianRidgePlugin method) (BernoulliNaiveBayesPlugin method) (CatBoostPlugin method) (CatBoostRegressorPlugin method) (ClassifierPlugin method), [1] (CoxnetRiskEstimationPlugin method) (CoxPHPlugin method) (DecisionTreePlugin method) (DeepHitRiskEstimationPlugin method) (ExtraTreeClassifierPlugin method) (GaussianNaiveBayesPlugin method) (GaussianProcessPlugin method) (GradientBoostingPlugin method) (HistGradientBoostingPlugin method) (KNeighborsRegressorPlugin method) (KNNPlugin method) (LightGBMPlugin method) (LinearDiscriminantAnalysisPlugin method) (LinearRegressionPlugin method) (LinearSVMPlugin method) (LogisticRegressionPlugin method) (LogLogisticAFTPlugin method) (LogNormalAFTPlugin method) (MLPRegressionPlugin method) (MultinomialNaiveBayesPlugin method) (NeuralNetsPlugin method) (NeuralNetsRegressionPlugin method) (PerceptronPlugin method) (PipelineMeta method) (QuadraticDiscriminantAnalysisPlugin method) (RandomForestPlugin method) (RandomForestRegressionPlugin method) (RegressionPlugin method), [1] (RidgeClassifierPlugin method) (RiskEstimationPlugin method), [1] (TabNetPlugin method) (TabNetRegressorPlugin method) (WeibullAFTPlugin method) (XGBoostPlugin method) (XGBoostRegressorPlugin method) (XGBoostRiskEstimationPlugin method)

get_confidence() (CohortRule method) get_difficulty() (CohortRule method) get_metric() (classifier_metrics method) get_params() (BaseAggregator method) (SimpleClassifierAggregator method) (Stacking method) get_pipeline() (PipelineSelector method) get_pipeline_from_named_args() (PipelineSelector method) get_pipeline_from_template() (PipelineSelector method) get_pipeline_template() (PipelineSelector method) get_ports() (in module autoprognosis.deploy.utils) get_type() (Classifiers method) (Explainers method) (Imputers method) (PluginLoader method) (Plugins method) (Predictions method) (Preprocessors method) (Regression method) (RiskEstimation method) (UncertaintyQuantification method) get_y_pred_proba_hlpr() (in module autoprognosis.utils.metrics) global_cohort (CohortMgmt attribute) GradientBoostingPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_gradient_boosting) group() (in module autoprognosis.plugins) grow_policies (CatBoostPlugin attribute) (CatBoostRegressorPlugin attribute) grow_policy (XGBoostPlugin attribute) (XGBoostRegressorPlugin attribute) (XGBoostRiskEstimationPlugin attribute)

H

hba1c_pct_to_mmol() (in module autoprognosis.apps.extras.biobank_diabetes) Header (class in autoprognosis.apps.common.pandas_to_streamlit) heartbeat() (DefaultHooks method) (Hooks method) HistGradientBoostingPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_hist_gradient_boosting) Hooks (class in autoprognosis.hooks.base) horizons (NewRiskEstimationAppProto attribute) HyperbandOptimizer (class in autoprognosis.explorers.core.optimizers.hyperband) hyperparameter_space() (AdaBoostPlugin static method) (BaggingPlugin static method) (BayesianRidgePlugin static method) (BernoulliNaiveBayesPlugin static method) (CatBoostPlugin static method) (CatBoostRegressorPlugin static method) (ClassifierPlugin static method), [1] (CoxnetRiskEstimationPlugin static method) (CoxPHPlugin static method) (DecisionTreePlugin static method) (DeepHitRiskEstimationPlugin static method) (ExtraTreeClassifierPlugin static method) (FastICAPlugin static method) (FeatureAgglomerationPlugin static method) (FeatureNormalizerPlugin static method) (GaussianNaiveBayesPlugin static method) (GaussianProcessPlugin static method) (GaussianRandomProjectionPlugin static method) (GradientBoostingPlugin static method) (HistGradientBoostingPlugin static method) (ImputerPlugin static method), [1] (KNeighborsRegressorPlugin static method) (KNNPlugin static method) (LightGBMPlugin static method) (LinearDiscriminantAnalysisPlugin static method) (LinearRegressionPlugin static method) (LinearSVMPlugin static method) (LogisticRegressionPlugin static method) (LogLogisticAFTPlugin static method) (LogNormalAFTPlugin static method) (MaxAbsScalerPlugin static method) (MinMaxScalerPlugin static method) (MLPRegressionPlugin static method) (MultinomialNaiveBayesPlugin static method) (NeuralNetsPlugin static method) (NeuralNetsRegressionPlugin static method) (NopPlugin static method), [1] (NormalTransformPlugin static method) (PCAPlugin static method) (PerceptronPlugin static method) (PipelineMeta static method) (PipelineSelector method) (Plugin static method) (PredictionPlugin static method), [1] (PreprocessorPlugin static method), [1] (QuadraticDiscriminantAnalysisPlugin static method) (RandomForestPlugin static method) (RandomForestRegressionPlugin static method) (RegressionPlugin static method), [1] (RidgeClassifierPlugin static method) (RiskEstimationPlugin static method), [1] (ScalerPlugin static method) (SoftImputePlugin static method) (TabNetPlugin static method) (TabNetRegressorPlugin static method) (UniformTransformPlugin static method) (VarianceThresholdPlugin static method) (WeibullAFTPlugin static method) (XGBoostPlugin static method) (XGBoostRegressorPlugin static method) (XGBoostRiskEstimationPlugin static method)

hyperparameter_space_for_layer() (PipelineMeta static method) hyperparameter_space_fqdn() (AdaBoostPlugin class method) (BaggingPlugin class method) (BayesianRidgePlugin class method) (BernoulliNaiveBayesPlugin class method) (CatBoostPlugin class method) (CatBoostRegressorPlugin class method) (ClassifierPlugin class method), [1] (CoxnetRiskEstimationPlugin class method) (CoxPHPlugin class method) (DecisionTreePlugin class method) (DeepHitRiskEstimationPlugin class method) (ExtraTreeClassifierPlugin class method) (FastICAPlugin class method) (FeatureAgglomerationPlugin class method) (FeatureNormalizerPlugin class method) (GaussianNaiveBayesPlugin class method) (GaussianProcessPlugin class method) (GaussianRandomProjectionPlugin class method) (GradientBoostingPlugin class method) (HistGradientBoostingPlugin class method) (ImputerPlugin class method), [1] (KNeighborsRegressorPlugin class method) (KNNPlugin class method) (LightGBMPlugin class method) (LinearDiscriminantAnalysisPlugin class method) (LinearRegressionPlugin class method) (LinearSVMPlugin class method) (LogisticRegressionPlugin class method) (LogLogisticAFTPlugin class method) (LogNormalAFTPlugin class method) (MaxAbsScalerPlugin class method) (MinMaxScalerPlugin class method) (MLPRegressionPlugin class method) (MultinomialNaiveBayesPlugin class method) (NeuralNetsPlugin class method) (NeuralNetsRegressionPlugin class method) (NopPlugin class method), [1] (NormalTransformPlugin class method) (PCAPlugin class method) (PerceptronPlugin class method) (Plugin class method) (PredictionPlugin class method), [1] (PreprocessorPlugin class method), [1] (QuadraticDiscriminantAnalysisPlugin class method) (RandomForestPlugin class method) (RandomForestRegressionPlugin class method) (RegressionPlugin class method), [1] (RidgeClassifierPlugin class method) (RiskEstimationPlugin class method), [1] (ScalerPlugin class method) (SoftImputePlugin class method) (TabNetPlugin class method) (TabNetRegressorPlugin class method) (UniformTransformPlugin class method) (VarianceThresholdPlugin class method) (WeibullAFTPlugin class method) (XGBoostPlugin class method) (XGBoostRegressorPlugin class method) (XGBoostRiskEstimationPlugin class method)

I

ImputerPlugin (class in autoprognosis.plugins.imputers) (class in autoprognosis.plugins.imputers.base) imputers (BaseAppProto attribute) Imputers (class in autoprognosis.plugins.imputers) imputers (NewClassificationAppProto attribute) (NewRiskEstimationAppProto attribute) inference() (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.aha.model) (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.framingham.model) (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.qrisk3.model) (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.ada.model) (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.diabetes_uk.model) (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.finrisk.model) (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.qdiabetes.model) info() (in module autoprognosis.logger) install() (in module autoprognosis.utils.pip) Integer (class in autoprognosis.plugins.core.params) invaseBase (class in autoprognosis.plugins.explainers.plugin_invase) invaseClassifier (class in autoprognosis.plugins.explainers.plugin_invase) invaseCV (class in autoprognosis.plugins.explainers.plugin_invase) INVASEPlugin (class in autoprognosis.plugins.explainers.plugin_invase) invaseRiskEstimation (class in autoprognosis.plugins.explainers.plugin_invase) inverse_transform() (ContinuousDataEncoder method) (DatetimeEncoder method) is_app_server_running() (in module autoprognosis.deploy.run) is_authenticated() (in module autoprognosis.apps.common.login) is_fitted() (AdaBoostPlugin method) (AggregatingEnsemble method) (BaggingPlugin method) (BaseEnsemble method) (BaseRegressionEnsemble method) (BayesianRidgePlugin method) (BernoulliNaiveBayesPlugin method) (CatBoostPlugin method) (CatBoostRegressorPlugin method) (ClassifierPlugin method), [1] (CoxnetRiskEstimationPlugin method) (CoxPHPlugin method) (DecisionTreePlugin method) (DeepHitRiskEstimationPlugin method) (ExtraTreeClassifierPlugin method) (FastICAPlugin method) (FeatureAgglomerationPlugin method) (FeatureNormalizerPlugin method) (GaussianNaiveBayesPlugin method) (GaussianProcessPlugin method) (GaussianRandomProjectionPlugin method) (GradientBoostingPlugin method) (HistGradientBoostingPlugin method) (ImputerPlugin method), [1] (KNeighborsRegressorPlugin method) (KNNPlugin method) (LightGBMPlugin method) (LinearDiscriminantAnalysisPlugin method) (LinearRegressionPlugin method) (LinearSVMPlugin method) (LogisticRegressionPlugin method) (LogLogisticAFTPlugin method) (LogNormalAFTPlugin method) (MaxAbsScalerPlugin method) (MinMaxScalerPlugin method) (MLPRegressionPlugin method) (MultinomialNaiveBayesPlugin method) (NeuralNetsPlugin method) (NeuralNetsRegressionPlugin method) (NopPlugin method), [1] (NormalTransformPlugin method) (PCAPlugin method) (PerceptronPlugin method) (PipelineMeta method) (Plugin method) (PredictionPlugin method), [1] (PreprocessorPlugin method), [1] (QuadraticDiscriminantAnalysisPlugin method) (RandomForestPlugin method) (RandomForestRegressionPlugin method) (RegressionPlugin method), [1] (RidgeClassifierPlugin method) (RiskEnsemble method) (RiskEnsembleCV method) (RiskEstimationPlugin method), [1] (ScalerPlugin method) (SoftImputePlugin method) (StackingEnsemble method) (TabNetPlugin method) (TabNetRegressorPlugin method) (UniformTransformPlugin method) (VarianceThresholdPlugin method) (WeibullAFTPlugin method) (WeightedEnsemble method) (WeightedEnsembleCV method) (WeightedRegressionEnsemble method) (XGBoostPlugin method) (XGBoostRegressorPlugin method) (XGBoostRiskEstimationPlugin method)

is_local_port_open() (in module autoprognosis.deploy.utils) item_separator (NpEncoder attribute) (numpy_encoder attribute) iterencode() (NpEncoder method) (numpy_encoder method)

J

JackknifePlugin (class in autoprognosis.plugins.uncertainty.plugin_jackknife)

K

kaplan_meier_estimator() (in module autoprognosis.utils.third_party.nonparametric) KernelSHAPPlugin (class in autoprognosis.plugins.explainers.plugin_kernel_shap) key_separator (NpEncoder attribute) (numpy_encoder attribute)

KNeighborsRegressorPlugin (class in autoprognosis.plugins.prediction.regression.plugin_kneighbors_regressor) KNNPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_knn)

L

LifelinesWrapper (class in autoprognosis.plugins.prediction.risk_estimation.helper_lifelines) LightGBMPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_lgbm) LimePlugin (class in autoprognosis.plugins.explainers.plugin_lime) LinearDiscriminantAnalysisPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_lda) LinearRegressionPlugin (class in autoprognosis.plugins.prediction.regression.plugin_linear_regression) LinearSVMPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_linear_svm) list() (Classifiers method) (Explainers method) (Imputers method) (PluginLoader method) (Plugins method) (Predictions method) (Preprocessors method) (Regression method) (RiskEstimation method) (UncertaintyQuantification method) list_available() (Classifiers method) (Explainers method) (Imputers method) (PluginLoader method) (Plugins method) (Predictions method) (Preprocessors method) (Regression method) (RiskEstimation method) (UncertaintyQuantification method) list_diff() (in module autoprognosis.plugins.ensemble.combos) load() (AdaBoostPlugin class method) (AggregatingEnsemble class method) (BaggingPlugin class method) (BaseEnsemble class method) (BaseRegressionEnsemble class method) (BayesianRidgePlugin class method) (BernoulliNaiveBayesPlugin class method) (CatBoostPlugin class method) (CatBoostRegressorPlugin class method) (ClassifierPlugin class method), [1] (CoxnetRiskEstimationPlugin class method) (CoxPHPlugin class method) (DecisionTreePlugin class method) (DeepHitRiskEstimationPlugin class method) (ExtraTreeClassifierPlugin class method) (FastICAPlugin class method) (FeatureAgglomerationPlugin class method) (FeatureNormalizerPlugin class method) (GaussianNaiveBayesPlugin class method) (GaussianProcessPlugin class method) (GaussianRandomProjectionPlugin class method) (GradientBoostingPlugin class method) (HistGradientBoostingPlugin class method) (ImputerPlugin class method), [1] (in module autoprognosis.utils.serialization) (KNeighborsRegressorPlugin class method) (KNNPlugin class method) (LightGBMPlugin class method) (LinearDiscriminantAnalysisPlugin class method) (LinearRegressionPlugin class method) (LinearSVMPlugin class method) (LogisticRegressionPlugin class method) (LogLogisticAFTPlugin class method) (LogNormalAFTPlugin class method) (MaxAbsScalerPlugin class method) (MinMaxScalerPlugin class method) (MLPRegressionPlugin class method) (MultinomialNaiveBayesPlugin class method) (NeuralNetsPlugin class method) (NeuralNetsRegressionPlugin class method) (NopPlugin class method), [1] (NormalTransformPlugin class method) (PCAPlugin class method) (PerceptronPlugin class method) (PipelineMeta static method) (Plugin class method) (PredictionPlugin class method), [1] (PreprocessorPlugin class method), [1] (QuadraticDiscriminantAnalysisPlugin class method) (RandomForestPlugin class method) (RandomForestRegressionPlugin class method) (RegressionPlugin class method), [1] (RidgeClassifierPlugin class method) (RiskEstimationPlugin class method), [1] (ScalerPlugin class method) (SoftImputePlugin class method) (StackingEnsemble class method) (TabNetPlugin class method) (TabNetRegressorPlugin class method) (UniformTransformPlugin class method) (VarianceThresholdPlugin class method) (WeibullAFTPlugin class method) (WeightedEnsemble class method) (WeightedEnsembleCV class method) (WeightedRegressionEnsemble class method) (XGBoostPlugin class method) (XGBoostRegressorPlugin class method) (XGBoostRiskEstimationPlugin class method)

load_depends() (in module autoprognosis.deploy.run) load_from_file() (in module autoprognosis.utils.serialization) load_model() (in module autoprognosis.utils.serialization) load_model_from_file() (in module autoprognosis.utils.serialization) load_template() (PipelineMeta static method) login() (in module autoprognosis.apps.common.login) LogisticRegressionPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_logistic_regression) LogLogisticAFTPlugin (class in autoprognosis.plugins.prediction.risk_estimation.plugin_loglogistic_aft) LogNormalAFTPlugin (class in autoprognosis.plugins.prediction.risk_estimation.plugin_lognormal_aft)

M

MAE() (in module autoprognosis.plugins.utils.metrics) majority_vote() (in module autoprognosis.plugins.ensemble.combos) MAR_mask() (in module autoprognosis.plugins.utils.simulate) Masking (class in autoprognosis.plugins.explainers.plugin_invase) match() (CohortMgmt method) (CohortRule method) match_all() (CohortMgmt method) MaxAbsScalerPlugin (class in autoprognosis.plugins.preprocessors.feature_scaling.plugin_maxabs_scaler) maximization() (in module autoprognosis.plugins.ensemble.combos) median() (in module autoprognosis.plugins.ensemble.combos) merge() (CohortRule method) MinMaxScalerPlugin (class in autoprognosis.plugins.preprocessors.feature_scaling.plugin_minmax_scaler) MLPRegressionPlugin (class in autoprognosis.plugins.prediction.regression.plugin_mlp_regressor) mmolL_to_mgdl() (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.aha.model) (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.framingham.model) (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.qrisk3.model) MNAR_mask_logistic() (in module autoprognosis.plugins.utils.simulate) MNAR_mask_quantiles() (in module autoprognosis.plugins.utils.simulate) MNAR_self_mask_logistic() (in module autoprognosis.plugins.utils.simulate) model_path (BaseAppProto attribute) (NewClassificationAppProto attribute) (NewRiskEstimationAppProto attribute) module autoprognosis autoprognosis.apps autoprognosis.apps.common autoprognosis.apps.common.login autoprognosis.apps.common.pandas_to_streamlit autoprognosis.apps.extras autoprognosis.apps.extras.biobank_cvd autoprognosis.apps.extras.biobank_diabetes autoprognosis.deploy autoprognosis.deploy.build autoprognosis.deploy.proto autoprognosis.deploy.run autoprognosis.deploy.utils autoprognosis.exceptions autoprognosis.explorers autoprognosis.explorers.classifiers autoprognosis.explorers.classifiers_combos autoprognosis.explorers.core autoprognosis.explorers.core.defaults autoprognosis.explorers.core.optimizer autoprognosis.explorers.core.optimizers autoprognosis.explorers.core.optimizers.bayesian autoprognosis.explorers.core.optimizers.hyperband autoprognosis.explorers.core.selector autoprognosis.explorers.regression autoprognosis.explorers.regression_combos autoprognosis.explorers.risk_estimation autoprognosis.explorers.risk_estimation_combos autoprognosis.hooks autoprognosis.hooks.base autoprognosis.hooks.default autoprognosis.logger autoprognosis.plugins autoprognosis.plugins.core autoprognosis.plugins.core.base_plugin autoprognosis.plugins.core.params autoprognosis.plugins.ensemble autoprognosis.plugins.ensemble.classifiers autoprognosis.plugins.ensemble.combos autoprognosis.plugins.ensemble.regression autoprognosis.plugins.ensemble.risk_estimation autoprognosis.plugins.explainers autoprognosis.plugins.explainers.base autoprognosis.plugins.explainers.plugin_invase autoprognosis.plugins.explainers.plugin_kernel_shap autoprognosis.plugins.explainers.plugin_lime autoprognosis.plugins.explainers.plugin_risk_effect_size autoprognosis.plugins.explainers.plugin_shap_permutation_sampler autoprognosis.plugins.explainers.plugin_symbolic_pursuit autoprognosis.plugins.imputers autoprognosis.plugins.imputers.base autoprognosis.plugins.imputers.plugin_softimpute autoprognosis.plugins.pipeline autoprognosis.plugins.pipeline.generators autoprognosis.plugins.prediction autoprognosis.plugins.prediction.base autoprognosis.plugins.prediction.classifiers autoprognosis.plugins.prediction.classifiers.base autoprognosis.plugins.prediction.classifiers.helper_calibration autoprognosis.plugins.prediction.classifiers.plugin_adaboost autoprognosis.plugins.prediction.classifiers.plugin_bagging autoprognosis.plugins.prediction.classifiers.plugin_bernoulli_naive_bayes autoprognosis.plugins.prediction.classifiers.plugin_catboost autoprognosis.plugins.prediction.classifiers.plugin_decision_trees autoprognosis.plugins.prediction.classifiers.plugin_extra_tree_classifier autoprognosis.plugins.prediction.classifiers.plugin_gaussian_naive_bayes autoprognosis.plugins.prediction.classifiers.plugin_gaussian_process autoprognosis.plugins.prediction.classifiers.plugin_gradient_boosting autoprognosis.plugins.prediction.classifiers.plugin_hist_gradient_boosting autoprognosis.plugins.prediction.classifiers.plugin_knn autoprognosis.plugins.prediction.classifiers.plugin_lda autoprognosis.plugins.prediction.classifiers.plugin_lgbm autoprognosis.plugins.prediction.classifiers.plugin_linear_svm autoprognosis.plugins.prediction.classifiers.plugin_logistic_regression autoprognosis.plugins.prediction.classifiers.plugin_multinomial_naive_bayes autoprognosis.plugins.prediction.classifiers.plugin_neural_nets autoprognosis.plugins.prediction.classifiers.plugin_perceptron autoprognosis.plugins.prediction.classifiers.plugin_qda autoprognosis.plugins.prediction.classifiers.plugin_random_forest autoprognosis.plugins.prediction.classifiers.plugin_ridge_classifier autoprognosis.plugins.prediction.classifiers.plugin_tabnet autoprognosis.plugins.prediction.classifiers.plugin_xgboost autoprognosis.plugins.prediction.regression autoprognosis.plugins.prediction.regression.base autoprognosis.plugins.prediction.regression.plugin_bayesian_ridge autoprognosis.plugins.prediction.regression.plugin_catboost_regressor autoprognosis.plugins.prediction.regression.plugin_kneighbors_regressor autoprognosis.plugins.prediction.regression.plugin_linear_regression autoprognosis.plugins.prediction.regression.plugin_mlp_regressor autoprognosis.plugins.prediction.regression.plugin_neural_nets_regression autoprognosis.plugins.prediction.regression.plugin_random_forest_regressor autoprognosis.plugins.prediction.regression.plugin_tabnet_regressor autoprognosis.plugins.prediction.regression.plugin_xgboost_regressor autoprognosis.plugins.prediction.risk_estimation autoprognosis.plugins.prediction.risk_estimation.base autoprognosis.plugins.prediction.risk_estimation.benchmarks autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.aha autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.aha.model autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.framingham autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.framingham.model autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.qrisk3 autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.qrisk3.model autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.ada autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.ada.model autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.diabetes_uk autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.diabetes_uk.model autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.finrisk autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.finrisk.model autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.qdiabetes autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.qdiabetes.model autoprognosis.plugins.prediction.risk_estimation.benchmarks.prostate_cancer autoprognosis.plugins.prediction.risk_estimation.benchmarks.prostate_cancer.predict autoprognosis.plugins.prediction.risk_estimation.helper_lifelines autoprognosis.plugins.prediction.risk_estimation.plugin_cox_ph autoprognosis.plugins.prediction.risk_estimation.plugin_coxnet autoprognosis.plugins.prediction.risk_estimation.plugin_deephit autoprognosis.plugins.prediction.risk_estimation.plugin_loglogistic_aft autoprognosis.plugins.prediction.risk_estimation.plugin_lognormal_aft autoprognosis.plugins.prediction.risk_estimation.plugin_survival_xgboost autoprognosis.plugins.prediction.risk_estimation.plugin_weibull_aft autoprognosis.plugins.preprocessors autoprognosis.plugins.preprocessors.base autoprognosis.plugins.preprocessors.dimensionality_reduction autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_fast_ica autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_feature_agglomeration autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_gauss_projection autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_nop autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_pca autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_variance_threshold autoprognosis.plugins.preprocessors.feature_scaling autoprognosis.plugins.preprocessors.feature_scaling.plugin_feature_normalizer autoprognosis.plugins.preprocessors.feature_scaling.plugin_maxabs_scaler autoprognosis.plugins.preprocessors.feature_scaling.plugin_minmax_scaler autoprognosis.plugins.preprocessors.feature_scaling.plugin_nop autoprognosis.plugins.preprocessors.feature_scaling.plugin_normal_transform autoprognosis.plugins.preprocessors.feature_scaling.plugin_scaler autoprognosis.plugins.preprocessors.feature_scaling.plugin_uniform_transform autoprognosis.plugins.uncertainty autoprognosis.plugins.uncertainty.base autoprognosis.plugins.uncertainty.plugin_cohort_explainer autoprognosis.plugins.uncertainty.plugin_conformal_prediction autoprognosis.plugins.uncertainty.plugin_jackknife autoprognosis.plugins.utils autoprognosis.plugins.utils.cast autoprognosis.plugins.utils.decorators autoprognosis.plugins.utils.metrics autoprognosis.plugins.utils.simulate autoprognosis.studies autoprognosis.studies._base autoprognosis.studies.classifiers autoprognosis.studies.regression autoprognosis.studies.risk_estimation autoprognosis.utils autoprognosis.utils.data_encoder autoprognosis.utils.distributions autoprognosis.utils.encoder autoprognosis.utils.metrics autoprognosis.utils.pandas autoprognosis.utils.parallel autoprognosis.utils.pip autoprognosis.utils.redis autoprognosis.utils.risk_estimation autoprognosis.utils.serialization autoprognosis.utils.tester autoprognosis.utils.third_party autoprognosis.utils.third_party.metrics autoprognosis.utils.third_party.nonparametric autoprognosis.utils.third_party.util autoprognosis.utils.torch autoprognosis.version

mro() (PipelineMeta method) MultinomialNaiveBayesPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_multinomial_naive_bayes)

N

n_learner_jobs() (in module autoprognosis.utils.parallel) n_opt_jobs() (in module autoprognosis.utils.parallel) name (BaseAppProto attribute) (NewClassificationAppProto attribute) (NewRiskEstimationAppProto attribute) name() (AdaBoostPlugin static method) (AggregatingEnsemble method) (BaggingPlugin static method) (BaseEnsemble method) (BaseRegressionEnsemble method) (BayesianRidgePlugin static method) (BernoulliNaiveBayesPlugin static method) (CatBoostPlugin static method) (CatBoostRegressorPlugin static method) (ClassifierPlugin static method), [1] (CohortExplainerPlugin static method) (ConformalPredictionPlugin static method) (CoxnetRiskEstimationPlugin static method) (CoxPHPlugin static method) (DecisionTreePlugin static method) (DeepHitRiskEstimationPlugin static method) (ExplainerPlugin static method), [1] (ExtraTreeClassifierPlugin static method) (FastICAPlugin static method) (FeatureAgglomerationPlugin static method) (FeatureNormalizerPlugin static method) (GaussianNaiveBayesPlugin static method) (GaussianProcessPlugin static method) (GaussianRandomProjectionPlugin static method) (GradientBoostingPlugin static method) (HistGradientBoostingPlugin static method) (ImputerPlugin static method), [1] (INVASEPlugin static method) (JackknifePlugin static method) (KernelSHAPPlugin static method) (KNeighborsRegressorPlugin static method) (KNNPlugin static method) (LightGBMPlugin static method) (LimePlugin static method) (LinearDiscriminantAnalysisPlugin static method) (LinearRegressionPlugin static method) (LinearSVMPlugin static method) (LogisticRegressionPlugin static method) (LogLogisticAFTPlugin static method) (LogNormalAFTPlugin static method) (MaxAbsScalerPlugin static method) (MinMaxScalerPlugin static method) (MLPRegressionPlugin static method) (MultinomialNaiveBayesPlugin static method) (NeuralNetsPlugin static method) (NeuralNetsRegressionPlugin static method) (NopPlugin static method), [1] (NormalTransformPlugin static method) (PCAPlugin static method) (PerceptronPlugin static method) (PipelineMeta static method) (PipelineSelector method) (Plugin static method) (PredictionPlugin static method), [1] (PreprocessorPlugin static method), [1] (QuadraticDiscriminantAnalysisPlugin static method) (RandomForestPlugin static method) (RandomForestRegressionPlugin static method) (RegressionPlugin static method), [1] (RidgeClassifierPlugin static method) (RiskEffectSizePlugin static method) (RiskEnsemble method) (RiskEnsembleCV method) (RiskEstimationPlugin static method), [1] (ScalerPlugin static method) (ShapPermutationSamplerPlugin static method) (SoftImputePlugin static method) (StackingEnsemble method) (SymbolicPursuitPlugin static method) (TabNetPlugin static method) (TabNetRegressorPlugin static method) (UncertaintyPlugin static method), [1] (UniformTransformPlugin static method) (VarianceThresholdPlugin static method) (WeibullAFTPlugin static method) (WeightedEnsemble method) (WeightedEnsembleCV method) (WeightedRegressionEnsemble method) (XGBoostPlugin static method) (XGBoostRegressorPlugin static method) (XGBoostRiskEstimationPlugin static method)

NeuralNetsPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_neural_nets) NeuralNetsRegressionPlugin (class in autoprognosis.plugins.prediction.regression.plugin_neural_nets_regression) NewClassificationAppProto (class in autoprognosis.deploy.proto) NewRiskEstimationAppProto (class in autoprognosis.deploy.proto) NopPlugin (class in autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_nop) (class in autoprognosis.plugins.preprocessors.feature_scaling.plugin_nop) NormalTransformPlugin (class in autoprognosis.plugins.preprocessors.feature_scaling.plugin_normal_transform) NpEncoder (class in autoprognosis.explorers.core.optimizers.hyperband) numeric_decode() (EncodersCallbacks method) numpy_encoder (class in autoprognosis.utils.encoder)

O

one_hot_encoder() (in module autoprognosis.utils.torch) optimize_floats() (in module autoprognosis.utils.pandas) optimize_ints() (in module autoprognosis.utils.pandas)

optimize_objects() (in module autoprognosis.utils.pandas) Optimizer (class in autoprognosis.explorers.core.optimizer) optuna() (RedisBackend method)

P

ParamRepeatPruner (class in autoprognosis.explorers.core.optimizers.bayesian) Params (class in autoprognosis.plugins.core.params) PCAPlugin (class in autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_pca) penalties (LinearSVMPlugin attribute) (PerceptronPlugin attribute) PerceptronPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_perceptron) pick_coeffs() (in module autoprognosis.plugins.utils.simulate) Pipeline() (in module autoprognosis.plugins.pipeline) PipelineMeta (class in autoprognosis.plugins.pipeline) PipelineSelector (class in autoprognosis.explorers.core.selector) plot() (ExplainerPlugin method), [1] (INVASEPlugin method) (KernelSHAPPlugin method) (LimePlugin method) (RiskEffectSizePlugin method) (ShapPermutationSamplerPlugin method) (SymbolicPursuitPlugin method) plot_alternatives (BaseAppProto attribute) (NewClassificationAppProto attribute) (NewRiskEstimationAppProto attribute) Plugin (class in autoprognosis.plugins.core.base_plugin) plugin (in module autoprognosis.plugins.explainers.plugin_invase) (in module autoprognosis.plugins.explainers.plugin_kernel_shap) (in module autoprognosis.plugins.explainers.plugin_lime) (in module autoprognosis.plugins.explainers.plugin_risk_effect_size) (in module autoprognosis.plugins.explainers.plugin_shap_permutation_sampler) (in module autoprognosis.plugins.explainers.plugin_symbolic_pursuit) (in module autoprognosis.plugins.imputers.plugin_softimpute) (in module autoprognosis.plugins.prediction.classifiers.plugin_adaboost) (in module autoprognosis.plugins.prediction.classifiers.plugin_bagging) (in module autoprognosis.plugins.prediction.classifiers.plugin_bernoulli_naive_bayes) (in module autoprognosis.plugins.prediction.classifiers.plugin_catboost) (in module autoprognosis.plugins.prediction.classifiers.plugin_decision_trees) (in module autoprognosis.plugins.prediction.classifiers.plugin_extra_tree_classifier) (in module autoprognosis.plugins.prediction.classifiers.plugin_gaussian_naive_bayes) (in module autoprognosis.plugins.prediction.classifiers.plugin_gaussian_process) (in module autoprognosis.plugins.prediction.classifiers.plugin_gradient_boosting) (in module autoprognosis.plugins.prediction.classifiers.plugin_hist_gradient_boosting) (in module autoprognosis.plugins.prediction.classifiers.plugin_knn) (in module autoprognosis.plugins.prediction.classifiers.plugin_lda) (in module autoprognosis.plugins.prediction.classifiers.plugin_lgbm) (in module autoprognosis.plugins.prediction.classifiers.plugin_linear_svm) (in module autoprognosis.plugins.prediction.classifiers.plugin_logistic_regression) (in module autoprognosis.plugins.prediction.classifiers.plugin_multinomial_naive_bayes) (in module autoprognosis.plugins.prediction.classifiers.plugin_neural_nets) (in module autoprognosis.plugins.prediction.classifiers.plugin_perceptron) (in module autoprognosis.plugins.prediction.classifiers.plugin_qda) (in module autoprognosis.plugins.prediction.classifiers.plugin_random_forest) (in module autoprognosis.plugins.prediction.classifiers.plugin_ridge_classifier) (in module autoprognosis.plugins.prediction.classifiers.plugin_tabnet) (in module autoprognosis.plugins.prediction.classifiers.plugin_xgboost) (in module autoprognosis.plugins.prediction.regression.plugin_bayesian_ridge) (in module autoprognosis.plugins.prediction.regression.plugin_catboost_regressor) (in module autoprognosis.plugins.prediction.regression.plugin_kneighbors_regressor) (in module autoprognosis.plugins.prediction.regression.plugin_linear_regression) (in module autoprognosis.plugins.prediction.regression.plugin_mlp_regressor) (in module autoprognosis.plugins.prediction.regression.plugin_neural_nets_regression) (in module autoprognosis.plugins.prediction.regression.plugin_random_forest_regressor) (in module autoprognosis.plugins.prediction.regression.plugin_tabnet_regressor) (in module autoprognosis.plugins.prediction.regression.plugin_xgboost_regressor) (in module autoprognosis.plugins.prediction.risk_estimation.plugin_cox_ph) (in module autoprognosis.plugins.prediction.risk_estimation.plugin_coxnet) (in module autoprognosis.plugins.prediction.risk_estimation.plugin_deephit) (in module autoprognosis.plugins.prediction.risk_estimation.plugin_loglogistic_aft) (in module autoprognosis.plugins.prediction.risk_estimation.plugin_lognormal_aft) (in module autoprognosis.plugins.prediction.risk_estimation.plugin_survival_xgboost) (in module autoprognosis.plugins.prediction.risk_estimation.plugin_weibull_aft) (in module autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_fast_ica) (in module autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_feature_agglomeration) (in module autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_gauss_projection) (in module autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_nop) (in module autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_pca) (in module autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_variance_threshold) (in module autoprognosis.plugins.preprocessors.feature_scaling.plugin_feature_normalizer) (in module autoprognosis.plugins.preprocessors.feature_scaling.plugin_maxabs_scaler) (in module autoprognosis.plugins.preprocessors.feature_scaling.plugin_minmax_scaler) (in module autoprognosis.plugins.preprocessors.feature_scaling.plugin_nop) (in module autoprognosis.plugins.preprocessors.feature_scaling.plugin_normal_transform) (in module autoprognosis.plugins.preprocessors.feature_scaling.plugin_scaler) (in module autoprognosis.plugins.preprocessors.feature_scaling.plugin_uniform_transform) (in module autoprognosis.plugins.uncertainty.plugin_cohort_explainer) (in module autoprognosis.plugins.uncertainty.plugin_conformal_prediction) (in module autoprognosis.plugins.uncertainty.plugin_jackknife) PluginLoader (class in autoprognosis.plugins.core.base_plugin) Plugins (class in autoprognosis.plugins) predict() (AdaBoostPlugin method) (ADAModel method) (AggregatingEnsemble method) (AHAModel method) (BaggingPlugin method) (BaseAggregator method) (BaseEnsemble method) (BaseRegressionEnsemble method) (BayesianRidgePlugin method) (BernoulliNaiveBayesPlugin method) (CatBoostPlugin method) (CatBoostRegressorPlugin method) (ClassifierPlugin method), [1] (CohortExplainerPlugin method) (ConformalPredictionPlugin method) (CoxnetRiskEstimationPlugin method) (CoxPHPlugin method) (DecisionTreePlugin method) (DeepHitRiskEstimationPlugin method) (DiabetesUKModel method) (ExtraTreeClassifierPlugin method) (FastICAPlugin method) (FeatureAgglomerationPlugin method) (FeatureNormalizerPlugin method) (FINRISKModel method) (FraminghamModel method) (GaussianNaiveBayesPlugin method) (GaussianProcessPlugin method) (GaussianRandomProjectionPlugin method) (GradientBoostingPlugin method) (HistGradientBoostingPlugin method) (ImputerPlugin method), [1] (JackknifePlugin method) (KNeighborsRegressorPlugin method) (KNNPlugin method) (LifelinesWrapper method) (LightGBMPlugin method) (LinearDiscriminantAnalysisPlugin method) (LinearRegressionPlugin method) (LinearSVMPlugin method) (LogisticRegressionPlugin method) (LogLogisticAFTPlugin method) (LogNormalAFTPlugin method) (MaxAbsScalerPlugin method) (MinMaxScalerPlugin method) (MLPRegressionPlugin method) (MultinomialNaiveBayesPlugin method) (NeuralNetsPlugin method) (NeuralNetsRegressionPlugin method) (NopPlugin method), [1] (NormalTransformPlugin method) (PCAPlugin method) (PerceptronPlugin method) (PipelineMeta method) (Plugin method) (PREDICT_prostate method) (PredictionPlugin method), [1] (PreprocessorPlugin method), [1] (QDiabetesModel method) (QRisk3Model method) (QuadraticDiscriminantAnalysisPlugin method) (RandomForestPlugin method) (RandomForestRegressionPlugin method) (RegressionPlugin method), [1] (RidgeClassifierPlugin method) (RiskEnsemble method) (RiskEnsembleCV method) (RiskEstimationPlugin method), [1] (ScalerPlugin method) (SimpleClassifierAggregator method) (SoftImputePlugin method) (Stacking method) (StackingEnsemble method) (TabNetPlugin method) (TabNetRegressorPlugin method) (UncertaintyPlugin method), [1] (UniformTransformPlugin method) (VarianceThresholdPlugin method) (WeibullAFTPlugin method) (WeightedEnsemble method) (WeightedEnsembleCV method) (WeightedRegressionEnsemble method) (XGBoostPlugin method) (XGBoostRegressorPlugin method) (XGBoostRiskEstimationPlugin method)

predict_internal() (PREDICT_prostate method) predict_ipcw() (CensoringDistributionEstimator method) predict_proba() (AdaBoostPlugin method) (AggregatingEnsemble method) (BaggingPlugin method) (BaseAggregator method) (BaseEnsemble method) (BayesianRidgePlugin method) (BernoulliNaiveBayesPlugin method) (CatBoostPlugin method) (CatBoostRegressorPlugin method) (CensoringDistributionEstimator method) (ClassifierPlugin method), [1] (CohortExplainerPlugin method) (ConformalPredictionPlugin method) (CoxnetRiskEstimationPlugin method) (CoxPHPlugin method) (DecisionTreePlugin method) (DeepHitRiskEstimationPlugin method) (ExtraTreeClassifierPlugin method) (GaussianNaiveBayesPlugin method) (GaussianProcessPlugin method) (GradientBoostingPlugin method) (HistGradientBoostingPlugin method) (JackknifePlugin method) (KNeighborsRegressorPlugin method) (KNNPlugin method) (LightGBMPlugin method) (LinearDiscriminantAnalysisPlugin method) (LinearRegressionPlugin method) (LinearSVMPlugin method) (LogisticRegressionPlugin method) (LogLogisticAFTPlugin method) (LogNormalAFTPlugin method) (MLPRegressionPlugin method) (MultinomialNaiveBayesPlugin method) (NeuralNetsPlugin method) (NeuralNetsRegressionPlugin method) (PerceptronPlugin method) (PipelineMeta method) (PredictionPlugin method), [1] (QuadraticDiscriminantAnalysisPlugin method) (RandomForestPlugin method) (RandomForestRegressionPlugin method) (RegressionPlugin method), [1] (RidgeClassifierPlugin method) (RiskEstimationPlugin method), [1] (SimpleClassifierAggregator method) (Stacking method) (StackingEnsemble method) (SurvivalFunctionEstimator method) (TabNetPlugin method) (TabNetRegressorPlugin method) (UncertaintyPlugin method), [1] (WeibullAFTPlugin method) (WeightedEnsemble method) (WeightedEnsembleCV method) (XGBoostPlugin method) (XGBoostRegressorPlugin method) (XGBoostRiskEstimationPlugin method) predict_proba_with_uncertainity() (WeightedEnsembleCV method) PREDICT_prostate (class in autoprognosis.plugins.prediction.risk_estimation.benchmarks.prostate_cancer.predict) predict_with_uncertainty() (RiskEnsembleCV method) PredictionPlugin (class in autoprognosis.plugins.prediction) (class in autoprognosis.plugins.prediction.base) Predictions (class in autoprognosis.plugins.prediction) PreprocessorPlugin (class in autoprognosis.plugins.preprocessors) (class in autoprognosis.plugins.preprocessors.base) Preprocessors (class in autoprognosis.plugins.preprocessors) pretrain_for_cv() (EnsembleSeeker method) (RegressionEnsembleSeeker method) (RiskEnsembleSeeker method) pretty_name() (ExplainerPlugin static method), [1] (INVASEPlugin static method) (KernelSHAPPlugin static method) (LimePlugin static method) (RiskEffectSizePlugin static method) (ShapPermutationSamplerPlugin static method) (SymbolicPursuitPlugin static method) print_score() (in module autoprognosis.utils.metrics)

Q

QDiabetesModel (class in autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.qdiabetes.model)

QRisk3Model (class in autoprognosis.plugins.prediction.risk_estimation.benchmarks.cvd.qrisk3.model) QuadraticDiscriminantAnalysisPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_qda)

R

RandomForestPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_random_forest) RandomForestRegressionPlugin (class in autoprognosis.plugins.prediction.regression.plugin_random_forest_regressor) read_csv_compressed() (in module autoprognosis.utils.pandas) RedisBackend (class in autoprognosis.utils.redis) register_existing_trials() (ParamRepeatPruner method) Regression (class in autoprognosis.plugins.prediction.regression) RegressionEnsembleSeeker (class in autoprognosis.explorers.regression_combos) RegressionPlugin (class in autoprognosis.plugins.prediction.regression) (class in autoprognosis.plugins.prediction.regression.base) RegressionSeeker (class in autoprognosis.explorers.regression) RegressionStudy (class in autoprognosis.studies.regression) reload() (Classifiers method) (Explainers method) (Imputers method) (PluginLoader method) (Predictions method) (Preprocessors method) (Regression method) (RiskEstimation method) (UncertaintyQuantification method)

remove() (in module autoprognosis.logger) report_score() (ParamRepeatPruner method) reset() (BuilderProgress method) RidgeClassifierPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_ridge_classifier) RiskEffectSizePlugin (class in autoprognosis.plugins.explainers.plugin_risk_effect_size) RiskEnsemble (class in autoprognosis.plugins.ensemble.risk_estimation) RiskEnsembleCV (class in autoprognosis.plugins.ensemble.risk_estimation) RiskEnsembleSeeker (class in autoprognosis.explorers.risk_estimation_combos) RiskEstimation (class in autoprognosis.plugins.prediction.risk_estimation) RiskEstimationPlugin (class in autoprognosis.plugins.prediction.risk_estimation) (class in autoprognosis.plugins.prediction.risk_estimation.base) RiskEstimationStudy (class in autoprognosis.studies.risk_estimation) RiskEstimatorSeeker (class in autoprognosis.explorers.risk_estimation) RMSE() (in module autoprognosis.plugins.utils.metrics) roc_auc_score() (classifier_metrics method) run() (Builder method) (ClassifierStudy method) (RegressionStudy method) (RiskEstimationStudy method) (Study method) run_server_streamlit() (in module autoprognosis.deploy.run)

S

safe_concat() (in module autoprognosis.utils.third_party.util) sample() (Categorical method) (Float method) (in module autoprognosis.plugins.explainers.plugin_invase) (Integer method) (Params method) sample_hyperparameters() (AdaBoostPlugin class method) (BaggingPlugin class method) (BayesianRidgePlugin class method) (BernoulliNaiveBayesPlugin class method) (CatBoostPlugin class method) (CatBoostRegressorPlugin class method) (ClassifierPlugin class method), [1] (CoxnetRiskEstimationPlugin class method) (CoxPHPlugin class method) (DecisionTreePlugin class method) (DeepHitRiskEstimationPlugin class method) (ExtraTreeClassifierPlugin class method) (FastICAPlugin class method) (FeatureAgglomerationPlugin class method) (FeatureNormalizerPlugin class method) (GaussianNaiveBayesPlugin class method) (GaussianProcessPlugin class method) (GaussianRandomProjectionPlugin class method) (GradientBoostingPlugin class method) (HistGradientBoostingPlugin class method) (ImputerPlugin class method), [1] (KNeighborsRegressorPlugin class method) (KNNPlugin class method) (LightGBMPlugin class method) (LinearDiscriminantAnalysisPlugin class method) (LinearRegressionPlugin class method) (LinearSVMPlugin class method) (LogisticRegressionPlugin class method) (LogLogisticAFTPlugin class method) (LogNormalAFTPlugin class method) (MaxAbsScalerPlugin class method) (MinMaxScalerPlugin class method) (MLPRegressionPlugin class method) (MultinomialNaiveBayesPlugin class method) (NeuralNetsPlugin class method) (NeuralNetsRegressionPlugin class method) (NopPlugin class method), [1] (NormalTransformPlugin class method) (PCAPlugin class method) (PerceptronPlugin class method) (PipelineSelector method) (Plugin class method) (PredictionPlugin class method), [1] (PreprocessorPlugin class method), [1] (QuadraticDiscriminantAnalysisPlugin class method) (RandomForestPlugin class method) (RandomForestRegressionPlugin class method) (RegressionPlugin class method), [1] (RidgeClassifierPlugin class method) (RiskEstimationPlugin class method), [1] (ScalerPlugin class method) (SoftImputePlugin class method) (TabNetPlugin class method) (TabNetRegressorPlugin class method) (UniformTransformPlugin class method) (VarianceThresholdPlugin class method) (WeibullAFTPlugin class method) (XGBoostPlugin class method) (XGBoostRegressorPlugin class method) (XGBoostRiskEstimationPlugin class method) sample_hyperparameters_fqdn() (AdaBoostPlugin class method) (BaggingPlugin class method) (BayesianRidgePlugin class method) (BernoulliNaiveBayesPlugin class method) (CatBoostPlugin class method) (CatBoostRegressorPlugin class method) (ClassifierPlugin class method), [1] (CoxnetRiskEstimationPlugin class method) (CoxPHPlugin class method) (DecisionTreePlugin class method) (DeepHitRiskEstimationPlugin class method) (ExtraTreeClassifierPlugin class method) (FastICAPlugin class method) (FeatureAgglomerationPlugin class method) (FeatureNormalizerPlugin class method) (GaussianNaiveBayesPlugin class method) (GaussianProcessPlugin class method) (GaussianRandomProjectionPlugin class method) (GradientBoostingPlugin class method) (HistGradientBoostingPlugin class method) (ImputerPlugin class method), [1] (KNeighborsRegressorPlugin class method) (KNNPlugin class method) (LightGBMPlugin class method) (LinearDiscriminantAnalysisPlugin class method) (LinearRegressionPlugin class method) (LinearSVMPlugin class method) (LogisticRegressionPlugin class method) (LogLogisticAFTPlugin class method) (LogNormalAFTPlugin class method) (MaxAbsScalerPlugin class method) (MinMaxScalerPlugin class method) (MLPRegressionPlugin class method) (MultinomialNaiveBayesPlugin class method) (NeuralNetsPlugin class method) (NeuralNetsRegressionPlugin class method) (NopPlugin class method), [1] (NormalTransformPlugin class method) (PCAPlugin class method) (PerceptronPlugin class method) (Plugin class method) (PredictionPlugin class method), [1] (PreprocessorPlugin class method), [1] (QuadraticDiscriminantAnalysisPlugin class method) (RandomForestPlugin class method) (RandomForestRegressionPlugin class method) (RegressionPlugin class method), [1] (RidgeClassifierPlugin class method) (RiskEstimationPlugin class method), [1] (ScalerPlugin class method) (SoftImputePlugin class method) (TabNetPlugin class method) (TabNetRegressorPlugin class method) (UniformTransformPlugin class method) (VarianceThresholdPlugin class method) (WeibullAFTPlugin class method) (XGBoostPlugin class method) (XGBoostRegressorPlugin class method) (XGBoostRiskEstimationPlugin class method) sample_hyperparameters_np() (AdaBoostPlugin class method) (BaggingPlugin class method) (BayesianRidgePlugin class method) (BernoulliNaiveBayesPlugin class method) (CatBoostPlugin class method) (CatBoostRegressorPlugin class method) (ClassifierPlugin class method), [1] (CoxnetRiskEstimationPlugin class method) (CoxPHPlugin class method) (DecisionTreePlugin class method) (DeepHitRiskEstimationPlugin class method) (ExtraTreeClassifierPlugin class method) (FastICAPlugin class method) (FeatureAgglomerationPlugin class method) (FeatureNormalizerPlugin class method) (GaussianNaiveBayesPlugin class method) (GaussianProcessPlugin class method) (GaussianRandomProjectionPlugin class method) (GradientBoostingPlugin class method) (HistGradientBoostingPlugin class method) (ImputerPlugin class method), [1] (KNeighborsRegressorPlugin class method) (KNNPlugin class method) (LightGBMPlugin class method) (LinearDiscriminantAnalysisPlugin class method) (LinearRegressionPlugin class method) (LinearSVMPlugin class method) (LogisticRegressionPlugin class method) (LogLogisticAFTPlugin class method) (LogNormalAFTPlugin class method) (MaxAbsScalerPlugin class method) (MinMaxScalerPlugin class method) (MLPRegressionPlugin class method) (MultinomialNaiveBayesPlugin class method) (NeuralNetsPlugin class method) (NeuralNetsRegressionPlugin class method) (NopPlugin class method), [1] (NormalTransformPlugin class method) (PCAPlugin class method) (PerceptronPlugin class method) (PipelineSelector method) (Plugin class method) (PredictionPlugin class method), [1] (PreprocessorPlugin class method), [1] (QuadraticDiscriminantAnalysisPlugin class method) (RandomForestPlugin class method) (RandomForestRegressionPlugin class method) (RegressionPlugin class method), [1] (RidgeClassifierPlugin class method) (RiskEstimationPlugin class method), [1] (ScalerPlugin class method) (SoftImputePlugin class method) (TabNetPlugin class method) (TabNetRegressorPlugin class method) (UniformTransformPlugin class method) (VarianceThresholdPlugin class method) (WeibullAFTPlugin class method) (XGBoostPlugin class method) (XGBoostRegressorPlugin class method) (XGBoostRiskEstimationPlugin class method) sample_np() (Categorical method) (Float method) (Integer method) (Params method) sample_params() (PipelineMeta method) save() (AdaBoostPlugin method) (AggregatingEnsemble method) (BaggingPlugin method) (BaseEnsemble method) (BaseRegressionEnsemble method) (BayesianRidgePlugin method) (BernoulliNaiveBayesPlugin method) (CatBoostPlugin method) (CatBoostRegressorPlugin method) (ClassifierPlugin method), [1] (CoxnetRiskEstimationPlugin method) (CoxPHPlugin method) (DecisionTreePlugin method) (DeepHitRiskEstimationPlugin method) (ExtraTreeClassifierPlugin method) (FastICAPlugin method) (FeatureAgglomerationPlugin method) (FeatureNormalizerPlugin method) (GaussianNaiveBayesPlugin method) (GaussianProcessPlugin method) (GaussianRandomProjectionPlugin method) (GradientBoostingPlugin method) (HistGradientBoostingPlugin method) (ImputerPlugin method), [1] (in module autoprognosis.utils.serialization) (KNeighborsRegressorPlugin method) (KNNPlugin method) (LightGBMPlugin method) (LinearDiscriminantAnalysisPlugin method) (LinearRegressionPlugin method) (LinearSVMPlugin method) (LogisticRegressionPlugin method) (LogLogisticAFTPlugin method) (LogNormalAFTPlugin method) (MaxAbsScalerPlugin method) (MinMaxScalerPlugin method) (MLPRegressionPlugin method) (MultinomialNaiveBayesPlugin method) (NeuralNetsPlugin method) (NeuralNetsRegressionPlugin method) (NopPlugin method), [1] (NormalTransformPlugin method) (PCAPlugin method) (PerceptronPlugin method) (PipelineMeta method) (Plugin method) (PredictionPlugin method), [1] (PreprocessorPlugin method), [1] (QuadraticDiscriminantAnalysisPlugin method) (RandomForestPlugin method) (RandomForestRegressionPlugin method) (RegressionPlugin method), [1] (RidgeClassifierPlugin method) (RiskEstimationPlugin method), [1] (ScalerPlugin method) (SoftImputePlugin method) (StackingEnsemble method) (TabNetPlugin method) (TabNetRegressorPlugin method) (UniformTransformPlugin method) (VarianceThresholdPlugin method) (WeibullAFTPlugin method) (WeightedEnsemble method) (WeightedEnsembleCV method) (WeightedRegressionEnsemble method) (XGBoostPlugin method) (XGBoostRegressorPlugin method) (XGBoostRiskEstimationPlugin method)

save_model() (in module autoprognosis.utils.serialization) save_model_to_file() (in module autoprognosis.utils.serialization) save_template() (PipelineMeta method) save_to_file() (in module autoprognosis.utils.serialization) ScalerPlugin (class in autoprognosis.plugins.preprocessors.feature_scaling.plugin_scaler) score() (AdaBoostPlugin method) (ADAModel method) (AggregatingEnsemble method) (AHAModel method) (BaggingPlugin method) (BaseEnsemble method) (BayesianRidgePlugin method) (BernoulliNaiveBayesPlugin method) (CatBoostPlugin method) (CatBoostRegressorPlugin method) (ClassifierPlugin method), [1] (CoxnetRiskEstimationPlugin method) (CoxPHPlugin method) (DecisionTreePlugin method) (DeepHitRiskEstimationPlugin method) (DiabetesUKModel method) (ExtraTreeClassifierPlugin method) (FINRISKModel method) (FraminghamModel method) (GaussianNaiveBayesPlugin method) (GaussianProcessPlugin method) (GradientBoostingPlugin method) (HistGradientBoostingPlugin method) (KNeighborsRegressorPlugin method) (KNNPlugin method) (LightGBMPlugin method) (LinearDiscriminantAnalysisPlugin method) (LinearRegressionPlugin method) (LinearSVMPlugin method) (LogisticRegressionPlugin method) (LogLogisticAFTPlugin method) (LogNormalAFTPlugin method) (MLPRegressionPlugin method) (MultinomialNaiveBayesPlugin method) (NeuralNetsPlugin method) (NeuralNetsRegressionPlugin method) (PerceptronPlugin method) (PredictionPlugin method), [1] (QDiabetesModel method) (QRisk3Model method) (QuadraticDiscriminantAnalysisPlugin method) (RandomForestPlugin method) (RandomForestRegressionPlugin method) (RegressionPlugin method), [1] (RidgeClassifierPlugin method) (RiskEstimationPlugin method), [1] (StackingEnsemble method) (TabNetPlugin method) (TabNetRegressorPlugin method) (WeibullAFTPlugin method) (WeightedEnsemble method) (WeightedEnsembleCV method) (XGBoostPlugin method) (XGBoostRegressorPlugin method) (XGBoostRiskEstimationPlugin method) score_classification_model() (in module autoprognosis.utils.tester) score_proba() (classifier_metrics method) score_to_proba() (in module autoprognosis.plugins.ensemble.combos) search() (ClassifierSeeker method) (EnsembleSeeker method) (RegressionEnsembleSeeker method) (RegressionSeeker method) (RiskEnsembleSeeker method) (RiskEstimatorSeeker method) search_best_args_for_estimator() (ClassifierSeeker method) (RegressionSeeker method) (RiskEstimatorSeeker method) search_estimator() (RiskEstimatorSeeker method) search_weights() (EnsembleSeeker method) (RegressionEnsembleSeeker method) (RiskEnsembleSeeker method) set_params() (BaseAggregator method) (SimpleClassifierAggregator method) (Stacking method) ShapPermutationSamplerPlugin (class in autoprognosis.plugins.explainers.plugin_shap_permutation_sampler) SimpleClassifierAggregator (class in autoprognosis.plugins.ensemble.combos) simulate_nan() (in module autoprognosis.plugins.utils.simulate) SliderFloat (class in autoprognosis.apps.common.pandas_to_streamlit) SliderInt (class in autoprognosis.apps.common.pandas_to_streamlit) SoftImputePlugin (class in autoprognosis.plugins.imputers.plugin_softimpute) solvers (LinearRegressionPlugin attribute) (LogisticRegressionPlugin attribute) (RidgeClassifierPlugin attribute) split_datasets() (in module autoprognosis.plugins.ensemble.combos) Stacking (class in autoprognosis.plugins.ensemble.combos) StackingEnsemble (class in autoprognosis.plugins.ensemble.classifiers) start_app_server() (in module autoprognosis.deploy.run) status (Builder property) (BuilderProgress property) stop_app_server() (in module autoprognosis.deploy.run) Study (class in autoprognosis.studies._base) StudyCancelled subtype() (AdaBoostPlugin static method) (BaggingPlugin static method) (BayesianRidgePlugin static method) (BernoulliNaiveBayesPlugin static method) (CatBoostPlugin static method) (CatBoostRegressorPlugin static method) (ClassifierPlugin static method), [1] (CoxnetRiskEstimationPlugin static method) (CoxPHPlugin static method) (DecisionTreePlugin static method) (DeepHitRiskEstimationPlugin static method) (ExtraTreeClassifierPlugin static method) (FastICAPlugin static method) (FeatureAgglomerationPlugin static method) (FeatureNormalizerPlugin static method) (GaussianNaiveBayesPlugin static method) (GaussianProcessPlugin static method) (GaussianRandomProjectionPlugin static method) (GradientBoostingPlugin static method) (HistGradientBoostingPlugin static method) (ImputerPlugin static method), [1] (KNeighborsRegressorPlugin static method) (KNNPlugin static method) (LightGBMPlugin static method) (LinearDiscriminantAnalysisPlugin static method) (LinearRegressionPlugin static method) (LinearSVMPlugin static method) (LogisticRegressionPlugin static method) (LogLogisticAFTPlugin static method) (LogNormalAFTPlugin static method) (MaxAbsScalerPlugin static method) (MinMaxScalerPlugin static method) (MLPRegressionPlugin static method) (MultinomialNaiveBayesPlugin static method) (NeuralNetsPlugin static method) (NeuralNetsRegressionPlugin static method) (NopPlugin static method), [1] (NormalTransformPlugin static method) (PCAPlugin static method) (PerceptronPlugin static method) (Plugin static method) (PredictionPlugin static method), [1] (PreprocessorPlugin static method), [1] (QuadraticDiscriminantAnalysisPlugin static method) (RandomForestPlugin static method) (RandomForestRegressionPlugin static method) (RegressionPlugin static method), [1] (RidgeClassifierPlugin static method) (RiskEstimationPlugin static method), [1] (ScalerPlugin static method) (SoftImputePlugin static method) (TabNetPlugin static method) (TabNetRegressorPlugin static method) (UniformTransformPlugin static method) (VarianceThresholdPlugin static method) (WeibullAFTPlugin static method) (XGBoostPlugin static method) (XGBoostRegressorPlugin static method) (XGBoostRiskEstimationPlugin static method) Surv (class in autoprognosis.utils.third_party.util) survival_probability_calibration() (in module autoprognosis.utils.risk_estimation) SurvivalFunctionEstimator (class in autoprognosis.utils.third_party.nonparametric) SymbolicPursuitPlugin (class in autoprognosis.plugins.explainers.plugin_symbolic_pursuit)

T

TabNetPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_tabnet) TabNetRegressorPlugin (class in autoprognosis.plugins.prediction.regression.plugin_tabnet_regressor) target_column (NewClassificationAppProto attribute) (NewRiskEstimationAppProto attribute) time_column (NewRiskEstimationAppProto attribute) to_dataframe() (in module autoprognosis.plugins.utils.cast) to_ndarray() (in module autoprognosis.plugins.utils.cast) trace() (in module autoprognosis.logger) traceback() (in module autoprognosis.logger) traceback_and_raise() (in module autoprognosis.logger) train() (BasicNet method), [1] transform() (AdaBoostPlugin method) (BaggingPlugin method) (BayesianRidgePlugin method) (BernoulliNaiveBayesPlugin method) (CatBoostPlugin method) (CatBoostRegressorPlugin method) (ClassifierPlugin method), [1] (ContinuousDataEncoder method) (CoxnetRiskEstimationPlugin method) (CoxPHPlugin method) (DatetimeEncoder method) (DecisionTreePlugin method) (DeepHitRiskEstimationPlugin method) (ExtraTreeClassifierPlugin method) (FastICAPlugin method) (FeatureAgglomerationPlugin method) (FeatureNormalizerPlugin method) (GaussianNaiveBayesPlugin method) (GaussianProcessPlugin method) (GaussianRandomProjectionPlugin method) (GradientBoostingPlugin method) (HistGradientBoostingPlugin method) (ImputerPlugin method), [1] (KNeighborsRegressorPlugin method) (KNNPlugin method) (LightGBMPlugin method) (LinearDiscriminantAnalysisPlugin method) (LinearRegressionPlugin method) (LinearSVMPlugin method) (LogisticRegressionPlugin method) (LogLogisticAFTPlugin method) (LogNormalAFTPlugin method) (MaxAbsScalerPlugin method) (MinMaxScalerPlugin method) (MLPRegressionPlugin method) (MultinomialNaiveBayesPlugin method) (NeuralNetsPlugin method) (NeuralNetsRegressionPlugin method) (NopPlugin method), [1] (NormalTransformPlugin method) (PCAPlugin method) (PerceptronPlugin method) (Plugin method) (PredictionPlugin method), [1] (PreprocessorPlugin method), [1] (QuadraticDiscriminantAnalysisPlugin method) (RandomForestPlugin method) (RandomForestRegressionPlugin method) (RegressionPlugin method), [1] (RidgeClassifierPlugin method) (RiskEstimationPlugin method), [1] (ScalerPlugin method) (SoftImputePlugin method) (TabNetPlugin method) (TabNetRegressorPlugin method) (UniformTransformPlugin method) (VarianceThresholdPlugin method) (WeibullAFTPlugin method) (XGBoostPlugin method) (XGBoostRegressorPlugin method) (XGBoostRiskEstimationPlugin method) type (BaseAppProto attribute) (NewClassificationAppProto attribute) (NewRiskEstimationAppProto attribute) type() (AdaBoostPlugin static method) (BaggingPlugin static method) (BayesianRidgePlugin static method) (BernoulliNaiveBayesPlugin static method) (CatBoostPlugin static method) (CatBoostRegressorPlugin static method) (ClassifierPlugin static method), [1] (CohortExplainerPlugin static method) (ConformalPredictionPlugin static method) (CoxnetRiskEstimationPlugin static method) (CoxPHPlugin static method) (DecisionTreePlugin static method) (DeepHitRiskEstimationPlugin static method) (ExplainerPlugin static method), [1] (ExtraTreeClassifierPlugin static method) (FastICAPlugin static method) (FeatureAgglomerationPlugin static method) (FeatureNormalizerPlugin static method) (GaussianNaiveBayesPlugin static method) (GaussianProcessPlugin static method) (GaussianRandomProjectionPlugin static method) (GradientBoostingPlugin static method) (HistGradientBoostingPlugin static method) (ImputerPlugin static method), [1] (INVASEPlugin static method) (JackknifePlugin static method) (KernelSHAPPlugin static method) (KNeighborsRegressorPlugin static method) (KNNPlugin static method) (LightGBMPlugin static method) (LimePlugin static method) (LinearDiscriminantAnalysisPlugin static method) (LinearRegressionPlugin static method) (LinearSVMPlugin static method) (LogisticRegressionPlugin static method) (LogLogisticAFTPlugin static method) (LogNormalAFTPlugin static method) (MaxAbsScalerPlugin static method) (MinMaxScalerPlugin static method) (MLPRegressionPlugin static method) (MultinomialNaiveBayesPlugin static method) (NeuralNetsPlugin static method) (NeuralNetsRegressionPlugin static method) (NopPlugin static method), [1] (NormalTransformPlugin static method) (PCAPlugin static method) (PerceptronPlugin static method) (PipelineMeta static method) (Plugin static method) (PredictionPlugin static method), [1] (PreprocessorPlugin static method), [1] (QuadraticDiscriminantAnalysisPlugin static method) (RandomForestPlugin static method) (RandomForestRegressionPlugin static method) (RegressionPlugin static method), [1] (RidgeClassifierPlugin static method) (RiskEffectSizePlugin static method) (RiskEstimationPlugin static method), [1] (ScalerPlugin static method) (ShapPermutationSamplerPlugin static method) (SoftImputePlugin static method) (SymbolicPursuitPlugin static method) (TabNetPlugin static method) (TabNetRegressorPlugin static method) (UncertaintyPlugin static method), [1] (UniformTransformPlugin static method) (VarianceThresholdPlugin static method) (WeibullAFTPlugin static method) (XGBoostPlugin static method) (XGBoostRegressorPlugin static method) (XGBoostRiskEstimationPlugin static method)

type2_female_model_a() (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.qdiabetes.model) type2_female_model_b() (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.qdiabetes.model) type2_female_model_c() (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.qdiabetes.model) type2_male_model_a() (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.qdiabetes.model) type2_male_model_b() (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.qdiabetes.model) type2_male_model_c() (in module autoprognosis.plugins.prediction.risk_estimation.benchmarks.diabetes.qdiabetes.model) types() (Classifiers method) (Explainers method) (Imputers method) (PluginLoader method) (Preprocessors method) (Regression method) (RiskEstimation method) (UncertaintyQuantification method)

U

UncertaintyPlugin (class in autoprognosis.plugins.uncertainty) (class in autoprognosis.plugins.uncertainty.base)

UncertaintyQuantification (class in autoprognosis.plugins.uncertainty) UniformTransformPlugin (class in autoprognosis.plugins.preprocessors.feature_scaling.plugin_uniform_transform)

V

VarianceThresholdPlugin (class in autoprognosis.plugins.preprocessors.dimensionality_reduction.plugin_variance_threshold)

W

warning() (in module autoprognosis.logger) WeibullAFTPlugin (class in autoprognosis.plugins.prediction.risk_estimation.plugin_weibull_aft) WeightedEnsemble (class in autoprognosis.plugins.ensemble.classifiers) WeightedEnsembleCV (class in autoprognosis.plugins.ensemble.classifiers) WeightedRegressionEnsemble (class in autoprognosis.plugins.ensemble.regression)

weights (KNeighborsRegressorPlugin attribute) (KNNPlugin attribute) (LogisticRegressionPlugin attribute) with_traceback() (BuildCancelled method) (StudyCancelled method) worker() (in module autoprognosis.deploy.build)

X

XGBoostPlugin (class in autoprognosis.plugins.prediction.classifiers.plugin_xgboost)

XGBoostRegressorPlugin (class in autoprognosis.plugins.prediction.regression.plugin_xgboost_regressor) XGBoostRiskEstimationPlugin (class in autoprognosis.plugins.prediction.risk_estimation.plugin_survival_xgboost)